nl
.
biopet
.
tools
mpileuptovcf
package
mpileuptovcf
Visibility
Public
All
Type Members
case class
Args
(
input:
File
=
null
,
output:
File
=
null
,
sample:
String
=
null
,
minDP:
Int
=
8
,
minAP:
Int
=
2
,
homoFraction:
Double
=
0.8
,
ploidy:
Int
=
2
,
seqError:
Double
=
0.005
,
refCalls:
Boolean
=
false
)
extends
Product
with
Serializable
class
ArgsParser
extends
AbstractOptParser
[
Args
]
Value Members
object
MpileupToVcf
extends
ToolCommand
[
Args
]
Ungrouped