nl
.
biopet
.
tools
extractadaptersfastqc
package
extractadaptersfastqc
Visibility
Public
All
Type Members
case class
Args
(
dataFile:
File
=
null
,
adapterOutputFile:
Option
[
File
] =
None
,
contamsOutputFile:
Option
[
File
] =
None
,
contaminated:
Boolean
=
true
,
contamFile:
Option
[
File
] =
None
,
adapterFile:
Option
[
File
] =
None
,
adapterCutoff:
Double
=
0.001
,
outputAsFasta:
Boolean
=
false
)
extends
Product
with
Serializable
class
ArgsParser
extends
AbstractOptParser
[
Args
]
Value Members
object
ExtractAdaptersFastqc
extends
ToolCommand
[
Args
]
Ungrouped