Class

nl.biopet.tools.downsampleregions

Args

Related Doc: package downsampleregions

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case class Args(bamFile: File = null, bedFile: File = null, inputR1: File = null, inputR2: Option[File] = None, outputR1A: File = null, outputR2A: Option[File] = None, outputR1B: File = null, outputR2B: Option[File] = None, deviation: Double = 0.0, seed: Long = 0) extends Product with Serializable

Args for DownsampleRegions

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Instance Constructors

  1. new Args(bamFile: File = null, bedFile: File = null, inputR1: File = null, inputR2: Option[File] = None, outputR1A: File = null, outputR2A: Option[File] = None, outputR1B: File = null, outputR2B: Option[File] = None, deviation: Double = 0.0, seed: Long = 0)

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Value Members

  1. final def !=(arg0: Any): Boolean

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  2. final def ##(): Int

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  3. final def ==(arg0: Any): Boolean

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  4. final def asInstanceOf[T0]: T0

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  5. val bamFile: File

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  6. val bedFile: File

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  7. def clone(): AnyRef

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    Attributes
    protected[java.lang]
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    @throws( ... )
  8. val deviation: Double

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  9. final def eq(arg0: AnyRef): Boolean

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  10. def finalize(): Unit

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    protected[java.lang]
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    @throws( classOf[java.lang.Throwable] )
  11. final def getClass(): Class[_]

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  12. val inputR1: File

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  13. val inputR2: Option[File]

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  14. final def isInstanceOf[T0]: Boolean

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  15. final def ne(arg0: AnyRef): Boolean

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  16. final def notify(): Unit

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  17. final def notifyAll(): Unit

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  18. val outputR1A: File

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  19. val outputR1B: File

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  20. val outputR2A: Option[File]

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  21. val outputR2B: Option[File]

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  22. val seed: Long

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  23. final def synchronized[T0](arg0: ⇒ T0): T0

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  24. final def wait(): Unit

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    @throws( ... )
  25. final def wait(arg0: Long, arg1: Int): Unit

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  26. final def wait(arg0: Long): Unit

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