Class/Object

nl.biopet.tools.digenicsearch

Broadcasts

Related Docs: object Broadcasts | package digenicsearch

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case class Broadcasts(samples: Array[String], dict: SAMSequenceDictionary, pedigree: PedigreeFileArray, annotations: Set[String], maxDistance: Option[Long], singleFilters: List[AnnotationFilter], pairFilters: List[AnnotationFilter], inputFiles: List[File], fractionsCutoffs: FractionsCutoffs, detectionMode: DetectionMode.Value, regions: Array[List[Region]], externalFiles: Array[File], externalFilesKeys: Array[String], singleExternalFilters: Array[List[ExternalFilter]], pairExternalFilters: Array[List[ExternalFilter]], usingOtherFamilies: Boolean) extends Product with Serializable

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Serializable, Serializable, Product, Equals, AnyRef, Any
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  1. Broadcasts
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Instance Constructors

  1. new Broadcasts(samples: Array[String], dict: SAMSequenceDictionary, pedigree: PedigreeFileArray, annotations: Set[String], maxDistance: Option[Long], singleFilters: List[AnnotationFilter], pairFilters: List[AnnotationFilter], inputFiles: List[File], fractionsCutoffs: FractionsCutoffs, detectionMode: DetectionMode.Value, regions: Array[List[Region]], externalFiles: Array[File], externalFilesKeys: Array[String], singleExternalFilters: Array[List[ExternalFilter]], pairExternalFilters: Array[List[ExternalFilter]], usingOtherFamilies: Boolean)

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Value Members

  1. final def !=(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any

  2. final def ##(): Int

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    Definition Classes
    AnyRef → Any

  3. final def ==(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any

  4. val annotations: Set[String]

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  5. final def asInstanceOf[T0]: T0

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    Definition Classes
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  6. def clone(): AnyRef

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  7. val detectionMode: DetectionMode.Value

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  8. val dict: SAMSequenceDictionary

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  9. final def eq(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef

  10. val externalFiles: Array[File]

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  11. val externalFilesKeys: Array[String]

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  12. def finalize(): Unit

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    Attributes
    protected[java.lang]
    Definition Classes
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    Annotations
    @throws( classOf[java.lang.Throwable] )

  13. val fractionsCutoffs: FractionsCutoffs

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  14. final def getClass(): Class[_]

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    Definition Classes
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  15. val inputFiles: List[File]

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  16. final def isInstanceOf[T0]: Boolean

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    Definition Classes
    Any

  17. val maxDistance: Option[Long]

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  18. final def ne(arg0: AnyRef): Boolean

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    Definition Classes
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  19. final def notify(): Unit

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  20. final def notifyAll(): Unit

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    Definition Classes
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  21. val pairExternalFilters: Array[List[ExternalFilter]]

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  22. val pairFilters: List[AnnotationFilter]

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  23. val pedigree: PedigreeFileArray

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  24. val regions: Array[List[Region]]

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  25. val samples: Array[String]

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  26. val singleExternalFilters: Array[List[ExternalFilter]]

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  27. val singleFilters: List[AnnotationFilter]

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  28. final def synchronized[T0](arg0: ⇒ T0): T0

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    Definition Classes
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  29. val usingOtherFamilies: Boolean

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  30. final def wait(): Unit

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    Definition Classes
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    Annotations
    @throws( ... )

  31. final def wait(arg0: Long, arg1: Int): Unit

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  32. final def wait(arg0: Long): Unit

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Inherited from Serializable

Inherited from Serializable

Inherited from Product

Inherited from Equals

Inherited from AnyRef

Inherited from Any

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