Class

nl.biopet.tools.basecounter.BaseCounter

GeneCount

Related Doc: package BaseCounter

Permalink

class GeneCount extends AnyRef

Linear Supertypes
AnyRef, Any
Ordering
  1. Alphabetic
  2. By Inheritance
Inherited
  1. GeneCount
  2. AnyRef
  3. Any
  1. Hide All
  2. Show All
Visibility
  1. Public
  2. All

Instance Constructors

  1. new GeneCount(gene: Gene)

    Permalink

Value Members

  1. final def !=(arg0: Any): Boolean

    Permalink
    Definition Classes
    AnyRef → Any
  2. final def ##(): Int

    Permalink
    Definition Classes
    AnyRef → Any
  3. final def ==(arg0: Any): Boolean

    Permalink
    Definition Classes
    AnyRef → Any
  4. def addRecord(samRecord: SAMRecord, sense: Boolean): Unit

    Permalink
  5. final def asInstanceOf[T0]: T0

    Permalink
    Definition Classes
    Any
  6. def clone(): AnyRef

    Permalink
    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  7. val counts: Counts

    Permalink
  8. final def eq(arg0: AnyRef): Boolean

    Permalink
    Definition Classes
    AnyRef
  9. def equals(arg0: Any): Boolean

    Permalink
    Definition Classes
    AnyRef → Any
  10. val exonCounts: Iterable[RegionCount]

    Permalink
  11. def finalize(): Unit

    Permalink
    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )
  12. val gene: Gene

    Permalink
  13. final def getClass(): Class[_]

    Permalink
    Definition Classes
    AnyRef → Any
  14. def hashCode(): Int

    Permalink
    Definition Classes
    AnyRef → Any
  15. val intronCounts: Iterable[RegionCount]

    Permalink
  16. def intronRegions: BedRecordList

    Permalink
  17. final def isInstanceOf[T0]: Boolean

    Permalink
    Definition Classes
    Any
  18. final def ne(arg0: AnyRef): Boolean

    Permalink
    Definition Classes
    AnyRef
  19. final def notify(): Unit

    Permalink
    Definition Classes
    AnyRef
  20. final def notifyAll(): Unit

    Permalink
    Definition Classes
    AnyRef
  21. final def synchronized[T0](arg0: ⇒ T0): T0

    Permalink
    Definition Classes
    AnyRef
  22. def toString(): String

    Permalink
    Definition Classes
    AnyRef → Any
  23. val transcripts: List[TranscriptCount]

    Permalink
  24. final def wait(): Unit

    Permalink
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  25. final def wait(arg0: Long, arg1: Int): Unit

    Permalink
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  26. final def wait(arg0: Long): Unit

    Permalink
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

Inherited from AnyRef

Inherited from Any

Ungrouped